Citing
======

You can also access metadata to cite hstrat in our ``CITATION.cff`` file `here <https://github.com/mmore500/hstrat/blob/master/CITATION.cff>`__. Formatted citations were generated via https://bibtex.online.

Software
--------

Please cite hstrat software as

bibtex:

.. code:: bibtex

   @article{moreno2022hstrat,
     doi = {10.21105/joss.04866},
     url = {https://doi.org/10.21105/joss.04866},
     year = {2022},
     publisher = {The Open Journal},
     volume = {7},
     number = {80},
     pages = {4866},
     author = {Matthew Andres Moreno and Emily Dolson and Charles Ofria},
     title = {hstrat: a Python Package for phylogenetic inference on distributed digital evolution populations},
     journal = {Journal of Open Source Software}
   }

APA:

   Moreno, M. A., Dolson, E., & Ofria, C. (2022). hstrat: A Python Package for Phylogenetic Inference on Distributed Digital Evolution Populations. Journal of Open Source Software, 7(80), 4866. https://doi.org/10.21105/joss.04866

Chicago:

   Moreno, Matthew Andres, Emily Dolson, and Charles Ofria. “hstrat: A Python Package for Phylogenetic Inference on Distributed Digital Evolution Populations.” Journal of Open Source Software 7, no. 80 (2022): 4866. https://doi.org/10.21105/joss.04866.

MLA:

   Moreno, Matthew Andres et al. “hstrat: A Python Package for Phylogenetic Inference on Distributed Digital Evolution Populations.” Journal of Open Source Software 7.80 (2022): 4866. https://doi.org/10.21105/joss.04866.

Methodology
-----------

Please cite hereditary stratigraphy methodology as

bibtex:

.. code:: bibtex

   @inproceedings{10.1162/isal_a_00550,
     author = {Moreno, Matthew Andres and Dolson, Emily and Ofria, Charles},
     title = "{Hereditary Stratigraphy: Genome Annotations to Enable Phylogenetic Inference over Distributed Populations}",
     volume = {ALIFE 2022: The 2022 Conference on Artificial Life},
     series = {ALIFE 2022: The 2022 Conference on Artificial Life},
     year = {2022},
     month = {07},
     booktitle = {Artificial Life Conference Proceedings},
     doi = {10.1162/isal_a_00550},
     url = {https://doi.org/10.1162/isal\_a\_00550},
     note = {64},
     eprint = {https://direct.mit.edu/isal/proceedings-pdf/isal/34/64/2035363/isal\_a\_00550.pdf},
   }

APA:

   Moreno, M., Dolson, E., & Ofria, C. (2022). Hereditary Stratigraphy: Genome Annotations to Enable Phylogenetic Inference over Distributed Populations. In Artificial Life Conference Proceedings. https://doi.org/10.1162/isal_a_00550

Chicago:

   Moreno, Matthew Andres, Emily, Dolson, and Charles, Ofria. “Hereditary Stratigraphy: Genome Annotations to Enable Phylogenetic Inference over Distributed Populations.” In Artificial Life Conference Proceedings. 2022. https://doi.org/10.1162/isal_a_00550

MLA:

   Moreno, Matthew Andres et al. “Hereditary Stratigraphy: Genome Annotations to Enable Phylogenetic Inference over Distributed Populations.” Artificial Life Conference Proceedings. 2022. https://doi.org/10.1162/isal_a_00550