hstrat

Top-level package for hstrat.

Modules

frozen_instrumentation

Frozen representations of genome annotations for efficient postprocessing and analysis.

genome_instrumentation

Data structures to annotate genomes with.

hstrat

Convenient library repack as a flat namespace.

juxtaposition

Functions that compare two columns.

phylogenetic_inference

Tools to infer phylogenetic history from extant genome annotations.

serialization

Tools to load and save hereditary stratigraphic columns.

stratum_retention_strategy

Tools to specify stratum retention policy.

stratum_retention_viz

Visualizations for stratum retention policies.

test_drive

Tools to create phylogenies and corresponding extant populations of hereditary stratigraph columns.